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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
candidate regulatory elements
174
gene expression
150
target gene predictions
133
chromatin state
127
accessible chromatin
54
binding sites
44
variant allelic effects
33
histone modifications
30
differential activity
17
eQTL
6
Fine-mapped variants
2
caQTL
Date released
379
September, 2022
287
February, 2021
78
February, 2024
41
May, 2021
36
March, 2023
32
June, 2020
29
August, 2021
18
January, 2020
18
May, 2020
16
November, 2022
15
March, 2020
14
February, 2020
12
February, 2023
10
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
January, 2022
3
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
664
bed bed3+
192
tsv
127
bed bed9
86
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1017
Homo sapiens
Biosample type
524
primary cell
326
tissue
140
cell line
27
in vitro differentiated cells
Organ
635
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
234
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1017
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
803
hg19
200
GRCh38
2
hg18
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
1017 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
2
1
7
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of umbilical vein
6
4
5
2
2
1
+ See 88 more…
tissue
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
11
1
adipose tissue
7
3
8
6
2
1
1
4
subcutaneous adipose tissue
2
5
1
2
1
1
6
3
+ See 27 more…
cell line
A549
21
19
18
1
2
1
EndoC_BH1
8
1
8
1
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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