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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
candidate regulatory elements
62
accessible chromatin
61
gene expression
54
target gene predictions
47
chromatin state
35
differential activity
23
binding sites
21
eQTL
20
variant allelic effects
14
Fine-mapped variants
14
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
104
September, 2022
72
February, 2021
49
March, 2023
40
February, 2024
36
May, 2021
21
March, 2020
18
May, 2020
15
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
1
May, 2022
Available data
247
bed bed3+
103
tsv
54
bigWig
41
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
423
Homo sapiens
Biosample type
198
tissue
184
primary cell
38
cell line
3
in vitro differentiated cells
Organ
635
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
234
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
423
AMP
22
ENCODE
22
T1D
20
KPMP
2
LungMap
2
community
Genome assembly (visualization)
309
hg19
115
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
423 results
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Clear Filters
candidate regulatory elements
accessible chromatin
gene expression
target gene predictions
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
2
13
1
2
1
2
2
body of pancreas
8
2
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
1
3
3
2
2
3
1
tibial artery
3
3
1
2
3
2
2
3
+ See 15 more…
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
4
4
6
pancreatic ductal cell
3
3
1
3
1
1
2
pancreatic beta cell
3
3
1
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 30 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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