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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
29
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
46
DNA binding
29
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
10
control
5
RNA binding protein
Date released
272
August, 2021
139
August, 2017
119
February, 2021
107
October, 2019
103
February, 2023
81
May, 2020
79
May, 2021
72
November, 2017
46
May, 2022
42
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
4
January, 2019
4
July, 2018
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
bigWig
171
bam
127
tsv
69
bed narrowPeak
30
fastq
21
bigBed narrowPeak
6
tagAlign
2
bed bed3+
Organism
83
Homo sapiens
Biosample type
43
in vitro differentiated cells
19
cell line
19
primary cell
2
tissue
Organ
18
pancreas
17
epithelium
3
blood
3
bodily fluid
1
spleen
Project
83
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
43
Kyle Gaulton, UCSD
40
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
GM12878
3
primary cell
monocyte
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
tissue
pancreas
1
spleen
1
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