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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
1
WGBS
Assay category
65
Transcription
8
DNA accessibility
1
DNA methylation
Target of assay
3
control
Date released
572
February, 2021
392
November, 2017
280
August, 2017
250
October, 2019
238
May, 2020
218
June, 2019
164
July, 2018
141
May, 2021
120
May, 2019
94
December, 2017
80
November, 2018
79
April, 2019
76
October, 2018
74
July, 2019
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
15
October, 2017
11
March, 2020
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
85
bigWig
82
bam
65
tsv
23
bed bedMethyl
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
56
tissue
18
primary cell
Organ
16
connective tissue
15
heart
13
brain
12
adipose tissue
8
blood vessel
8
vasculature
7
kidney
7
liver
5
epithelium
4
musculature of body
4
pancreas
3
artery
1
pericardium
Project
74
AMP
Genome assembly (visualization)
72
hg19
71
GRCh38
Lab
74
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
hic
BIOSAMPLE
ASSAY
74 results
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total RNA-seq
small RNA-seq
ATAC-seq
single cell RNA-seq
FAIRE-seq
WGBS
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart left ventricle
2
2
right lobe of liver
2
2
+ See 18 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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