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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1625
candidate regulatory elements
1174
target gene predictions
971
histone modifications
809
binding sites
573
accessible chromatin
119
variant allelic effects
39
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2354
February, 2021
1598
September, 2022
289
February, 2024
282
May, 2021
277
June, 2020
133
May, 2020
96
October, 2022
64
January, 2020
51
August, 2021
44
March, 2020
39
May, 2024
33
August, 2017
19
November, 2022
15
May, 2022
13
November, 2019
9
October, 2019
6
February, 2023
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5342
bed bed3+
829
bed bed9
608
tsv
245
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5297
Homo sapiens
Biosample type
2113
cell line
1681
tissue
1202
primary cell
341
in vitro differentiated cells
4
stem cell
Organ
403
epithelium
309
brain
306
kidney
282
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
165
heart
157
vasculature
155
skin of body
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
98
liver
eye
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
lymphatic vessel
13
mouth
11
bronchus
11
pituitary gland
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5342
AMP
320
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5336
hg19
501
GRCh38
1
hg18
organ_slims!
eye
spinal cord
stomach
BIOSAMPLE
TYPE
5342 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 757 more…
tissue
heart
37
20
1
1
5
2
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
lung
33
17
+ See 207 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
2
CD14-positive monocyte
8
19
+ See 253 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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