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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
DNase-seq
3
Hi-C
Assay category
62
DNA accessibility
3
3D chromatin structure
Date released
60
June, 2019
3
July, 2019
2
November, 2018
Available data
454
bam
446
bigWig
394
bed narrowPeak
221
bigBed narrowPeak
196
tsv
124
tagAlign
77
bed broadPeak
68
bigBed broadPeak
65
bed bed3+
21
fastq
10
bed bedMethyl
10
bigBed bedMethyl
3
bedpe bed3+
3
hdf5
3
hic
1
bed bed3
1
tagAlign bed3+
Organism
65
Homo sapiens
Biosample type
54
tissue
11
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
0
intestine
Project
65
AMP
Genome assembly (visualization)
62
GRCh38
52
hg19
Lab
65
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
65 results
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DNase-seq
Hi-C
tissue
heart
18
brain
14
heart left ventricle
3
coronary artery
2
frontal cortex
2
+ See 14 more…
primary cell
cardiac fibroblast
3
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
+ See 1 more…
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