Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
candidate regulatory elements
92
target gene predictions
57
accessible chromatin
42
binding sites
34
histone modifications
17
variant allelic effects
8
chromatin state
3
eQTL
2
caQTL
Date released
142
February, 2021
140
September, 2022
25
June, 2020
16
February, 2024
16
May, 2021
13
October, 2022
9
January, 2020
9
May, 2020
8
August, 2017
7
November, 2022
3
March, 2020
3
May, 2022
2
November, 2020
2
September, 2018
2
September, 2023
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
402
bed bed3+
71
bed bed9
51
tsv
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
402
Homo sapiens
Biosample type
196
primary cell
79
tissue
74
cell line
52
in vitro differentiated cells
1
stem cell
Organ
393
epithelium
309
brain
306
kidney
274
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
402
AMP
60
ENCODE
3
LungMap
2
T1D
1
ITG
Genome assembly (visualization)
401
hg19
17
GRCh38
BIOSAMPLE
TYPE
402 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
primary cell
foreskin fibroblast
6
2
1
4
2
foreskin keratinocyte
11
4
osteoblast
2
2
5
3
2
fibroblast of lung
6
4
2
1
keratinocyte
3
3
1
2
1
1
+ See 34 more…
tissue
adipose tissue
7
8
2
1
1
1
thyroid gland
8
5
1
omental fat pad
5
2
2
lower leg skin
6
2
subcutaneous adipose tissue
2
2
1
1
1
+ See 10 more…
cell line
GM23248
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
RPMI7951
2
1
1
SK-MEL-5
2
1
1
iPS DF 19.11
2
2
+ See 24 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download