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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
candidate regulatory elements
139
target gene predictions
43
binding sites
29
histone modifications
22
accessible chromatin
3
chromatin state
2
variant allelic effects
Date released
150
September, 2022
149
February, 2021
53
February, 2024
22
June, 2020
12
May, 2021
8
October, 2022
3
August, 2017
1
March, 2020
Available data
398
bed bed3+
75
bed bed9
12
tsv
Organism
398
Homo sapiens
Biosample type
194
cell line
122
primary cell
47
tissue
34
in vitro differentiated cells
1
stem cell
Organ
393
epithelium
309
brain
306
kidney
274
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
398
AMP
18
ENCODE
Genome assembly (visualization)
398
hg19
51
GRCh38
BIOSAMPLE
TYPE
398 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
chromatin state
variant allelic effects
cell line
H1-hESC
1
39
2
1
1
MCF-7
9
6
3
2
1
H9
7
8
GM23248
2
1
1
1
1
HUES8
4
1
1
+ See 37 more…
primary cell
foreskin fibroblast
6
2
4
2
1
foreskin keratinocyte
11
4
trophoblast cell
7
5
1
1
keratinocyte
3
3
1
2
1
1
mammary epithelial cell
3
1
4
1
1
+ See 13 more…
tissue
chorionic villus
8
4
trophoblast
4
3
1
1
lower leg skin
6
2
embryonic facial prominence
1
1
1
suprapubic skin
3
+ See 7 more…
in vitro differentiated cells
endodermal cell
4
2
mesodermal cell
4
1
1
trophoblast cell
2
2
ectodermal cell
2
1
foreskin keratinocyte
1
1
1
+ See 6 more…
stem cell
H1-hESC
1
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