Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
candidate regulatory elements
25
target gene predictions
16
accessible chromatin
4
chromatin state
4
histone modifications
4
variant allelic effects
3
binding sites
1
eQTL
1
sQTL
Date released
37
September, 2022
21
February, 2021
5
February, 2024
5
June, 2020
5
May, 2020
4
May, 2021
3
August, 2017
3
January, 2020
3
March, 2020
1
April, 2019
1
August, 2021
1
June, 2021
1
November, 2019
1
October, 2019
Available data
91
bed bed3+
27
tsv
18
bed bed9
10
bigWig
2
bigBed bed9
1
bigBed narrowPeak
Organism
91
Homo sapiens
Biosample type
75
tissue
13
cell line
3
primary cell
Organ
epithelium
309
brain
306
kidney
274
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
91
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
91
hg19
10
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
91 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
variant allelic effects
binding sites
eQTL
sQTL
tissue
pancreas
5
5
5
1
1
1
1
islet of Langerhans
1
6
3
1
1
2
1
1
body of pancreas
8
5
1
Peyer's patch
7
3
1
endocrine pancreas
7
4
+ See 2 more…
cell line
GM18507
1
2
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
primary cell
pancreatic endocrine cell
1
1
pancreatic stellate cell
1
See all biosamples
Download