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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
319
ChIP-seq
Assay category
319
DNA binding
Target of assay
240
transcription factor
76
histone
76
histone modification
66
recombinant protein
46
broad histone mark
35
RNA binding protein
30
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
319
November, 2017
210
June, 2019
191
October, 2019
142
August, 2017
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
48
May, 2021
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
2
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
319
Homo sapiens
Biosample type
255
cell line
58
tissue
6
primary cell
Organ
255
liver
64
brain
4
epithelium
4
vasculature
2
blood vessel
Project
319
AMP
Genome assembly (visualization)
280
GRCh38
265
hg19
Lab
319
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
gonad
BIOSAMPLE
ASSAY
319 results
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Clear Filters
ChIP-seq
cell line
HepG2
255
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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