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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
Assay category
74
DNA binding
Target of assay
histone
233
histone modification
131
narrow histone mark
102
broad histone mark
66
control
8
transcription factor
Date released
23
May, 2020
11
August, 2017
11
November, 2017
9
October, 2019
8
February, 2021
7
August, 2021
3
May, 2021
2
October, 2017
Available data
2197
bam
1913
bigWig
1332
tsv
823
fastq
764
bed narrowPeak
535
bigBed narrowPeak
171
bed broadPeak
169
bigBed broadPeak
162
bed bed3+
99
txt
74
tagAlign
29
bed bedMethyl
29
bigBed bedMethyl
18
bedpe bed3+
15
hic
12
bed bed3
7
bed bedgraph
3
csv
3
hdf5
3
tar
2
ibed
1
bedpe
1
vcf
Organism
73
Homo sapiens
Biosample type
52
tissue
12
in vitro differentiated cells
9
cell line
1
primary cell
Organ
28
liver
19
brain
6
artery
6
blood vessel
6
heart
6
vasculature
4
pancreas
3
connective tissue
epithelium
2
musculature of body
1
adipose tissue
Project
74
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
epithelium
kidney
target.investigated_as!
histone
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
in vitro differentiated cells
neural progenitor cell
7
cardiomyocytes
3
adipocyte
2
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
primary cell
skeletal muscle myoblast
1
See all biosamples
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