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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
151
gene expression
117
accessible chromatin
110
candidate regulatory elements
63
target gene predictions
50
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
1
differential activity
Date released
196
February, 2021
151
September, 2022
76
February, 2024
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
400
bed bed3+
133
tsv
81
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
609
Homo sapiens
Biosample type
481
primary cell
61
tissue
41
cell line
26
in vitro differentiated cells
Organ
609
epithelium
509
kidney
460
brain
378
connective tissue
361
musculature of body
298
lung
266
intestine
247
heart
244
limb
220
vasculature
216
bodily fluid
212
embryo
205
blood
193
skin of body
189
pancreas
174
blood vessel
165
large intestine
146
liver
143
extraembryonic component
109
stomach
105
eye
87
adipose tissue
86
bone element
81
uterus
80
mammary gland
79
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
609
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
453
hg19
117
GRCh38
month_released!
August, 2017
March, 2023
BIOSAMPLE
TYPE
609 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
differential activity
primary cell
hepatocyte
13
7
2
2
1
1
2
4
endothelial cell
9
4
3
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
4
2
1
+ See 85 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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