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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
2
ATAC-seq
1
pCHi-C
Assay category
65
DNA binding
2
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
6
histone
6
histone modification
6
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
6
October, 2019
1
January, 2018
1
March, 2020
Available data
61
bam
60
fastq
56
bigWig
55
bed narrowPeak
54
bigBed narrowPeak
1
tagAlign
1
tsv
Organism
68
Homo sapiens
Biosample type
61
cell line
7
tissue
Organ
788
liver
734
pancreas
342
epithelium
327
heart
299
kidney
286
brain
228
connective tissue
170
vasculature
164
blood vessel
116
limb
105
adipose tissue
96
musculature of body
75
artery
61
blood
61
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
18
ureter
8
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
68
AMP
8
T1D
Genome assembly (visualization)
56
hg19
55
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
February, 2021
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
cell line
GM12878
60
1
tissue
islet of Langerhans
4
1
ovary
1
pituitary gland
1
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