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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1216target gene predictions
  • 944chromatin state
  • 872candidate regulatory elements
  • 632accessible chromatin
  • 341gene expression
  • 181eQTL
  • 139variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 84Fine-mapped variants
  • 53differential activity
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 377February, 2024
  • 289June, 2020
  • 155May, 2020
  • 128March, 2020
  • 123August, 2021
  • 106January, 2022
  • 99October, 2022
  • 89January, 2020
  • 64February, 2020
  • 61March, 2023
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3259bed bed3+
  • 3115tsv
  • 869bed bed9
  • 263bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 25txt
  • 24csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7320Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 481DGA
  • 356T1D
  • 290ChIP-Atlas
  • 219BLUEPRINT
  • 1744DN
  • 174AMP
  • 149GTEx
  • 128ENCODE
  • 124 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 91CMDGA
  • 67HPAP
  • 67T2DKP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4677tissue
  • 1365primary cell
  • 1039cell line
  • 281in vitro differentiated cells
  • 4stem cell
Organ
  • 2820vasculature
  • 2787blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 451epithelium
  • 357brain
  • 321kidney
  • 293connective tissue
  • 277musculature of body
  • 229lung
  • 206pancreas
  • 199heart
  • 199intestine
  • 186limb
  • 160embryo
  • 132liver
  • 126skin of body
  • 122large intestine
  • 110extraembryonic component
  • 88eye
  • 81stomach
  • 76adipose tissue
  • 71uterus
  • 62small intestine
  • 59artery
  • 53mammary gland
  • 53placenta
  • 50bone element
  • 49adrenal gland
  • 49prostate gland
  • 46ureter
  • 37thymus
  • 36gonad
  • 36penis
  • 35lymph node
  • 34spinal cord
  • 31esophagus
  • 24spleen
  • 22nerve
  • 19lymphoid tissue
  • 18testis
  • 17ovary
  • 17thyroid gland
  • 15mouth
  • 12pituitary gland
  • 10breast
  • 10lymphatic vessel
  • 9skeleton
  • 9urinary bladder
  • 8bronchus
  • 8tongue
  • 8vagina
  • 5bone marrow
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 7367AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4175hg19
  • 1562GRCh38
  • 4hg18
month_released!
  • February, 2021
BIOSAMPLE
TYPE

7367 results

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Clear Filters
pQTL
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
gene expression
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart202119522
stomach211919311
brain1618162121
kidney1416141011
primary cell
monocyte11715484211
common myeloid progenitor, CD34-positive141313
CD8-positive, alpha-beta T cell312330
B cell1081222
CD14-positive monocyte1944
cell line
HeLa-S355331
A54919181811
H1-hESC3911181
K562237611
EndoC_BH118811
in vitro differentiated cells
neural progenitor cell54410714
hematopoietic multipotent progenitor cell10101011
adipocyte6624
embryonic stem cell156
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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