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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
74
chromatin state
67
target gene predictions
50
histone modifications
42
accessible chromatin
36
Fine-mapped variants
29
eQTL
19
gene expression
18
binding sites
17
variant allelic effects
Date released
183
September, 2022
115
February, 2021
38
March, 2020
29
January, 2020
21
June, 2020
20
May, 2020
18
February, 2020
18
January, 2022
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
September, 2023
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
Available data
306
bed bed3+
67
bed bed9
67
tsv
21
bigWig
6
bigBed bed9
1
bed bed9+
Organism
464
Homo sapiens
Biosample type
349
tissue
66
cell line
45
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
614
epithelium
509
kidney
455
brain
376
connective tissue
358
musculature of body
295
lung
264
intestine
243
heart
241
limb
222
vasculature
214
bodily fluid
206
embryo
204
pancreas
203
blood
189
skin of body
176
blood vessel
163
large intestine
150
liver
140
extraembryonic component
108
stomach
105
eye
86
adipose tissue
86
bone element
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
70
placenta
68
artery
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
bronchus
12
breast
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
465
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
422
hg19
153
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
465 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain
29
18
16
3
2
2
1
1
1
caudate nucleus
5
4
3
1
2
3
2
1
1
substantia nigra
5
3
2
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 56 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
2
2
1
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
Daoy
2
1
1
1
1
+ See 8 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 9 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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