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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
gene expression
115
accessible chromatin
100
candidate regulatory elements
63
target gene predictions
53
chromatin state
41
binding sites
41
variant allelic effects
28
differential activity
26
histone modifications
3
eQTL
2
caQTL
Date released
192
February, 2021
151
September, 2022
76
February, 2024
36
March, 2023
34
May, 2021
24
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
November, 2019
Available data
387
bed bed3+
169
tsv
80
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
632
Homo sapiens
Biosample type
505
primary cell
61
tissue
40
cell line
26
in vitro differentiated cells
Organ
637
epithelium
509
kidney
465
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
242
heart
242
limb
235
pancreas
219
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
176
blood vessel
168
large intestine
150
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
68
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
33
spleen
26
testis
24
lymphoid tissue
nerve
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
632
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
440
hg19
106
GRCh38
month_released!
November, 2019
organ_slims!
nerve
trachea
BIOSAMPLE
TYPE
632 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 85 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
7
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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