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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
63
target gene predictions
52
gene expression
49
chromatin state
45
accessible chromatin
31
differential activity
19
eQTL
13
variant allelic effects
8
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
137
September, 2022
72
February, 2021
45
March, 2023
36
May, 2021
27
February, 2024
11
June, 2020
11
March, 2020
8
August, 2021
8
January, 2022
7
August, 2018
6
May, 2020
October, 2019
4
August, 2017
4
January, 2020
4
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
234
bed bed3+
80
tsv
44
bed bed9
30
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
389
Homo sapiens
Biosample type
260
tissue
87
primary cell
39
cell line
3
in vitro differentiated cells
Organ
643
epithelium
509
kidney
466
brain
390
connective tissue
363
musculature of body
299
lung
270
intestine
245
heart
244
limb
231
pancreas
223
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
177
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
389
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
292
hg19
72
GRCh38
month_released!
October, 2019
BIOSAMPLE
TYPE
389 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
stomach
40
21
1
19
3
1
1
islet of Langerhans
1
11
3
6
13
1
2
1
2
2
2
body of pancreas
8
5
2
4
1
1
3
ovary
8
6
1
4
1
1
pancreas
5
5
3
4
1
1
1
1
+ See 14 more…
primary cell
pancreatic ductal cell
1
3
2
3
1
1
2
pancreatic alpha cell
1
3
2
3
1
pancreatic beta cell
1
3
2
3
1
pancreatic delta cell
1
3
2
3
1
pancreatic acinar cell
1
3
1
3
1
+ See 15 more…
cell line
EndoC_BH1
1
8
8
1
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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