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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
30
ChIP-seq
26
total RNA-seq
1
Hi-C
1
MPRA
1
single cell RNA-seq
1
snATAC-seq
Assay category
39
DNA accessibility
30
DNA binding
27
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
control
2
RNA binding protein
2
chromatin remodeller
Date released
667
February, 2021
361
August, 2017
335
November, 2017
307
August, 2021
275
October, 2019
273
May, 2020
237
May, 2021
210
June, 2019
168
July, 2018
106
February, 2023
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
66
May, 2022
59
November, 2019
57
March, 2020
49
April, 2018
47
October, 2018
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
5
March, 2019
5
September, 2017
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
68
bed narrowPeak
55
fastq
54
bam
50
bigWig
30
bigBed narrowPeak
8
txt
1
bed bed3+
Organism
97
Homo sapiens
Biosample type
69
tissue
29
cell line
Organ
41
liver
27
blood
27
bodily fluid
24
pancreas
3
spleen
2
musculature of body
Project
137
HPAP
98
AMP
Genome assembly (visualization)
69
hg19
30
GRCh38
Lab
40
Karen Mohlke, UNC
34
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
1
inconsistent control
target.investigated_as!
control
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
MPRA
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
islet of Langerhans
18
6
spleen
3
skeletal muscle tissue
1
1
cell line
GM12878
27
HepG2
1
MIN6
1
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