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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
total RNA-seq
26
ATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
33
Transcription
26
DNA accessibility
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
670
February, 2021
411
August, 2017
319
August, 2021
315
November, 2017
296
May, 2020
246
May, 2021
228
October, 2019
188
June, 2019
168
July, 2018
105
February, 2023
94
December, 2017
92
May, 2019
90
July, 2019
86
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
55
March, 2020
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
October, 2017
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
59
bam
37
bed narrowPeak
33
tsv
31
bigWig
2
bedpe bed3+
2
hic
Organism
74
Homo sapiens
Biosample type
53
tissue
16
cell line
5
in vitro differentiated cells
Organ
56
pancreas
16
epithelium
brain
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
74
AMP
Genome assembly (visualization)
59
hg19
57
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
74 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
C1 segment of cervical spinal cord
1
adipose tissue(adipose white tissue)
1
ascending aorta
1
body of pancreas
1
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cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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