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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 131total RNA-seq
  • 80ChIP-seq
  • 34ATAC-seq
  • 1DNAme array
Assay category
  • 131Transcription
  • 80DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 55histone
  • 55histone modification
  • 32broad histone mark
  • 23narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 670February, 2021
  • 411August, 2017
  • 406November, 2017
  • 319August, 2021
  • 314October, 2019
  • 296May, 2020
  • 246May, 2021
  • 218June, 2019
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 106February, 2023
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 66May, 2022
  • 61November, 2019
  • 57March, 2020
  • 49April, 2018
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 5March, 2019
  • 4August, 2018
  • 3June, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 167bigWig
  • 141bam
  • 122tsv
  • 48bed narrowPeak
  • 6tagAlign
  • 2bed bed3+
Organism
  • 246Homo sapiens
Biosample type
  • 132in vitro differentiated cells
  • 55primary cell
  • 39tissue
  • 20cell line
Organ
  • 60pancreas
  • 25epithelium
  • 3heart
  • 2embryo
  • 1connective tissue
Project
  • 246AMP
  • 153T1D
Genome assembly (visualization)
  • 180hg19
  • 140GRCh38
Lab
  • 163AMP-T2D consortium
  • 83Kyle Gaulton, UCSD
Audit category:
  • 88inconsistent ontology term
BIOSAMPLE
ASSAY

246 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNAme array
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
primary cell
CD8-positive, alpha-beta T cell233
monocyte11131
naive thymus-derived CD4-positive, alpha-beta T cell2
embryonic stem cell1
neutrophil1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
cell line
EndoC_BH1416
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