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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
63
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
670
February, 2021
408
August, 2017
319
August, 2021
300
November, 2017
296
May, 2020
246
May, 2021
228
October, 2019
188
June, 2019
168
July, 2018
105
February, 2023
92
May, 2019
91
December, 2017
90
July, 2019
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
55
March, 2020
49
April, 2018
40
May, 2024
February, 2018
33
December, 2018
24
January, 2019
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
October, 2017
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
79
fastq
78
bam
71
bigWig
64
bed narrowPeak
64
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
1
csv
Organism
79
Homo sapiens
Biosample type
54
cell line
24
tissue
1
primary cell
Organ
48
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
brain
1
adipose tissue
1
connective tissue
Project
79
AMP
Genome assembly (visualization)
70
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
1
missing controlled_by
month_released!
February, 2018
organ_slims!
brain
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
13
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
omental fat pad
1
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primary cell
pancreatic cell
1
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