Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
118
candidate regulatory elements
65
target gene predictions
64
chromatin state
37
binding sites
35
accessible chromatin
20
histone modifications
17
gene expression
16
variant allelic effects
9
Fine-mapped variants
9
eQTL
4
differential activity
3
caQTL
Date released
165
September, 2022
108
February, 2021
18
February, 2024
16
January, 2020
15
May, 2020
13
June, 2020
12
March, 2020
8
May, 2021
8
October, 2022
6
January, 2022
5
February, 2020
4
February, 2023
4
March, 2023
3
March, 2024
3
May, 2024
3
November, 2019
2
August, 2017
2
October, 2019
1
August, 2021
1
May, 2019
Available data
294
bed bed3+
62
bed bed9
31
tsv
23
bigWig
8
bigBed bed9
2
txt
Organism
397
Homo sapiens
Biosample type
200
primary cell
109
tissue
79
cell line
9
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
397
AMP
35
KPMP
16
ENCODE
3
LungMap
Genome assembly (visualization)
365
hg19
117
GRCh38
BIOSAMPLE
TYPE
397 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
differential activity
caQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
4
keratinocyte
3
3
3
1
2
1
+ See 26 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
aorta
4
4
4
1
thoracic aorta
4
2
3
1
1
+ See 11 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
iPS DF 19.7
2
1
1
+ See 18 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download