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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
27
ChIP-seq
13
ATAC-seq
2
DNase-seq
Assay category
67
Transcription
27
DNA binding
15
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
narrow histone mark
Date released
150
February, 2021
34
October, 2019
8
February, 2023
1
February, 2020
Available data
100
bam
88
txt
81
bigWig
63
tsv
27
bed narrowPeak
18
bigBed narrowPeak
4
bed bed3
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
193
Homo sapiens
Biosample type
193
tissue
Organ
731
liver
691
pancreas
650
connective tissue
479
adipose tissue
353
heart
321
epithelium
292
kidney
210
vasculature
205
blood vessel
169
brain
158
bone element
135
artery
107
limb
83
musculature of body
60
blood
60
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
193
AMP
1
T1D
Genome assembly (visualization)
93
hg19
89
GRCh38
Lab
193
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
193 results
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RNA microarray
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
bone element
84
bone tissue
58
tibial nerve
5
27
1
2
acetabular part of hip bone
1
1
ilium
1
1
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