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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
215
candidate regulatory elements
178
gene expression
153
accessible chromatin
136
target gene predictions
122
chromatin state
73
histone modifications
56
variant allelic effects
54
binding sites
36
Fine-mapped variants
32
eQTL
28
differential activity
2
caQTL
Date released
319
September, 2022
297
February, 2021
77
February, 2024
45
May, 2021
44
June, 2020
44
March, 2020
41
January, 2020
36
March, 2023
32
May, 2020
26
February, 2020
23
August, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
10
May, 2024
9
August, 2017
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
3
September, 2023
2
May, 2022
2
November, 2019
1
July, 2020
Available data
687
bed bed3+
236
tsv
113
bed bed9
98
bigWig
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1084
Homo sapiens
Biosample type
529
primary cell
410
tissue
115
cell line
30
in vitro differentiated cells
1
stem cell
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1085
AMP
150
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
851
hg19
263
GRCh38
organ_slims!
artery
BIOSAMPLE
TYPE
1085 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
eQTL
differential activity
caQTL
primary cell
hepatocyte
2
13
7
2
1
4
2
1
endothelial cell
3
9
4
1
2
2
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 91 more…
tissue
brain
29
1
2
16
18
3
1
1
2
caudate nucleus
5
1
2
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
5
1
2
3
1
3
3
cerebellum
3
2
1
2
2
1
3
2
+ See 76 more…
cell line
EndoC_BH1
8
8
1
1
1
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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