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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
173
candidate regulatory elements
109
target gene predictions
92
chromatin state
61
accessible chromatin
43
gene expression
39
binding sites
30
histone modifications
21
eQTL
16
variant allelic effects
9
Fine-mapped variants
8
differential activity
2
caQTL
Date released
242
September, 2022
164
February, 2021
29
June, 2020
22
May, 2021
21
February, 2024
14
October, 2022
13
March, 2020
11
January, 2020
10
August, 2017
10
February, 2020
10
May, 2020
9
January, 2022
8
May, 2024
7
August, 2021
7
March, 2023
7
November, 2022
3
May, 2022
3
November, 2020
2
March, 2024
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
442
bed bed3+
82
bed bed9
55
tsv
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
603
Homo sapiens
Biosample type
261
tissue
223
primary cell
68
cell line
50
in vitro differentiated cells
1
stem cell
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
603
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
541
hg19
130
GRCh38
2
hg18
BIOSAMPLE
TYPE
603 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
5
6
1
3
1
+ See 20 more…
primary cell
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
3
2
1
2
6
fibroblast of dermis
4
4
3
1
+ See 38 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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