Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 80candidate regulatory elements
  • 64target gene predictions
  • 57differential activity
  • 53accessible chromatin
  • 48chromatin state
  • 40gene expression
  • 31binding sites
  • 25histone modifications
  • 17eQTL
  • 16variant allelic effects
  • 6Fine-mapped variants
  • 3caQTL
Date released
  • 120September, 2022
  • 109February, 2021
  • 51May, 2026
  • 20June, 2020
  • 16February, 2024
  • 16May, 2021
  • 12October, 2022
  • 10January, 2020
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7August, 2021
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 5July, 2026
  • 3May, 2022
  • 3November, 2020
  • 2July, 2025
  • 2October, 2019
  • 2September, 2018
  • 2September, 2023
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 288bed bed3+
  • 47tsv
  • 41bed bed9
  • 19bigWig
  • 7txt
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 440Homo sapiens
Collection Tags
  • 120EpiMap
  • 70DGA
  • 65ChIP-Atlas
  • 60ENCODE
  • 51pyxis
  • 37 T2DKP
  • 14AMP
  • 13T2DKP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 7T1D
  • 7T2D
  • 6eQTLCatalogue
  • 5ENCODE-rE2G
  • 1BLUEPRINT
Biosample type
  • 264primary cell
  • 92tissue
  • 52in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 3365blood
  • 2856vasculature
  • 2853bodily fluid
  • 2834blood vessel
  • 2659vein
  • 903brain
  • 641epithelium
  • 613kidney
  • 476heart
  • 440connective tissue
  • 428lung
  • 375musculature of body
  • 339intestine
  • 286skin of body
  • 279pancreas
  • 244limb
  • 235liver
  • 220large intestine
  • 213embryo
  • 171extraembryonic component
  • 157eye
  • 142adipose tissue
  • 131stomach
  • 111muscle organ
  • 101bone element
  • 98mammary gland
  • 95placenta
  • 93small intestine
  • 92adrenal gland
  • 92thymus
  • 91uterus
  • 87prostate gland
  • 83artery
  • 73ureter
  • 64penis
  • 63spleen
  • 62gonad
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 45thyroid gland
  • 44esophagus
  • 31testis
  • 30ovary
  • 25nerve
  • 24lymphoid tissue
  • 22skeleton
  • 21mouth
  • 15breast
  • 13bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12lymphatic vessel
  • 12tongue
  • 12vagina
  • 10bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 440AMP
  • 50ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 328hg19
  • 78GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE

440 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
differential activity
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
primary cell
osteoblast2251232
fibroblast of lung6442
foreskin fibroblast621142
fibroblast of dermis4431
fibroblast2126
tissue
adipose tissue78263141
omental fat pad5422223
subcutaneous adipose tissue2215613
subcutaneous abdominal adipose tissue51
bone tissue4
in vitro differentiated cells
adipocyte4746111
mesenchymal stem cell341211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego