Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 89candidate regulatory elements
  • 60target gene predictions
  • 53accessible chromatin
  • 48chromatin state
  • 43gene expression
  • 31binding sites
  • 25histone modifications
  • 21eQTL
  • 16variant allelic effects
  • 12differential activity
  • 8Fine-mapped variants
  • 3caQTL
Date released
  • 120September, 2022
  • 109February, 2021
  • 20June, 2020
  • 18February, 2024
  • 16May, 2021
  • 12October, 2022
  • 10January, 2020
  • 10March, 2025
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 8May, 2024
  • 7August, 2017
  • 7August, 2021
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 5October, 2025
  • 3May, 2022
  • 3November, 2020
  • 2July, 2025
  • 2October, 2019
  • 2September, 2018
  • 2September, 2023
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 291bed bed3+
  • 59tsv
  • 41bed bed9
  • 19bigWig
  • 7txt
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 409Homo sapiens
Collection Tags
  • 120EpiMap
  • 70DGA
  • 65ChIP-Atlas
  • 60ENCODE
  • 37 T2DKP
  • 17STARNET
  • 14AMP
  • 13T2DKP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 7T1D
  • 7T2D
  • 6FNIH_projects-heart
  • 6eQTLCatalogue
  • 2FNIH_projects-liver
  • 1BLUEPRINT
Biosample type
  • 221primary cell
  • 106tissue
  • 50in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 2874vasculature
  • 2859bodily fluid
  • 2848blood
  • 2828blood vessel
  • 2658vein
  • 650epithelium
  • 509kidney
  • 467brain
  • 409connective tissue
  • 386musculature of body
  • 299lung
  • 270intestine
  • 247heart
  • 244limb
  • 237pancreas
  • 213embryo
  • 194skin of body
  • 168large intestine
  • 163liver
  • 143extraembryonic component
  • 110stomach
  • 105eye
  • 104adipose tissue
  • 86bone element
  • 81mammary gland
  • 81uterus
  • 80small intestine
  • 79artery
  • 78prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 63adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 41esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15lymphatic vessel
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 10bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 409AMP
  • 50ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 336hg19
  • 82GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE

409 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
osteoblast2251232
fibroblast of lung6442
foreskin fibroblast621142
fibroblast32126
fibroblast of dermis4431
tissue
adipose tissue78263141
subcutaneous adipose tissue22168124
omental fat pad5222223
visceral fat112231
subcutaneous abdominal adipose tissue51
in vitro differentiated cells
adipocyte4646111
mesenchymal stem cell331211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego