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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
target gene predictions
85
candidate regulatory elements
42
chromatin state
21
binding sites
18
histone modifications
16
accessible chromatin
11
gene expression
1
eQTL
1
variant allelic effects
Date released
123
September, 2022
82
February, 2021
52
February, 2024
16
June, 2020
9
May, 2021
8
August, 2021
1
August, 2017
1
January, 2022
1
March, 2020
1
March, 2024
1
October, 2022
Available data
242
bed bed3+
41
bed bed9
11
tsv
Organism
295
Homo sapiens
Biosample type
180
cell line
50
tissue
34
in vitro differentiated cells
30
primary cell
1
stem cell
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
295
AMP
2
ENCODE
Genome assembly (visualization)
283
hg19
93
GRCh38
BIOSAMPLE
TYPE
295 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
2
1
1
1
1
+ See 24 more…
tissue
chorionic villus
4
8
4
prostate gland
2
4
2
2
2
1
1
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
olfactory neurosphere cell line
1
1
1
1
+ See 4 more…
primary cell
trophoblast cell
5
7
4
1
1
epithelial cell of prostate
3
4
2
primordial germ cell
1
1
luminal epithelial cell of prostatic duct
1
stem cell
H1-hESC
1
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