Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
target gene predictions
57
candidate regulatory elements
28
chromatin state
13
binding sites
11
histone modifications
10
accessible chromatin
10
gene expression
Date released
81
September, 2022
53
February, 2021
51
February, 2024
10
June, 2020
8
August, 2021
7
May, 2021
1
August, 2017
1
March, 2020
1
October, 2022
Available data
176
bed bed3+
27
bed bed9
10
tsv
Organism
213
Homo sapiens
Collection Tags
81
EpiMap
51
4DN
33
ChIP-Atlas
31
ENCODE
10
AMP
6
DGA
Biosample type
127
cell line
35
tissue
30
in vitro differentiated cells
20
primary cell
1
stem cell
Organ
3365
blood
2856
vasculature
2853
bodily fluid
2834
blood vessel
2659
vein
903
brain
641
epithelium
613
kidney
476
heart
440
connective tissue
428
lung
375
musculature of body
339
intestine
286
skin of body
279
pancreas
244
limb
235
liver
220
large intestine
213
embryo
171
extraembryonic component
157
eye
142
adipose tissue
131
stomach
111
muscle organ
101
bone element
98
mammary gland
95
placenta
93
small intestine
92
adrenal gland
92
thymus
91
uterus
87
prostate gland
83
artery
73
ureter
64
penis
63
spleen
62
gonad
62
lymph node
60
__MARKER__
49
spinal cord
45
thyroid gland
44
esophagus
31
testis
30
ovary
25
nerve
24
lymphoid tissue
22
skeleton
21
mouth
15
breast
13
bronchus
13
pituitary gland
13
urinary bladder
12
lymphatic vessel
12
tongue
12
vagina
10
bone marrow
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
213
AMP
2
ENCODE
Genome assembly (visualization)
203
hg19
78
GRCh38
BIOSAMPLE
TYPE
213 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 14 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
cardiogenic mesoderm
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
primordial germ cell
1
1
stem cell
H1-hESC
1
See all biosamples
Download