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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
184
candidate regulatory elements
181
gene expression
138
accessible chromatin
110
target gene predictions
106
chromatin state
51
variant allelic effects
47
binding sites
34
histone modifications
28
differential activity
9
Fine-mapped variants
9
eQTL
4
caQTL
Date released
265
September, 2022
245
February, 2021
81
February, 2024
38
May, 2021
36
March, 2023
31
August, 2021
31
June, 2020
26
January, 2020
26
May, 2020
21
March, 2020
19
February, 2020
15
February, 2023
15
November, 2022
10
May, 2024
7
October, 2019
6
April, 2019
6
August, 2018
6
October, 2022
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
572
bed bed3+
199
tsv
98
bed bed9
97
bigWig
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
901
Homo sapiens
Biosample type
539
primary cell
285
tissue
50
cell line
27
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
901
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
683
hg19
202
GRCh38
BIOSAMPLE
TYPE
901 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
histone modifications
differential activity
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte
2
13
7
2
1
2
1
4
endothelial cell
3
9
4
2
2
1
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 94 more…
tissue
heart
37
3
5
20
21
2
1
1
heart left ventricle
11
1
3
7
8
2
1
1
coronary artery
3
1
3
3
3
2
3
2
1
pigmented layer of retina
20
heart right ventricle
6
1
1
5
5
1
+ See 31 more…
cell line
EndoC_BH1
8
8
1
1
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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