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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
candidate regulatory elements
188
gene expression
140
accessible chromatin
125
target gene predictions
116
chromatin state
49
variant allelic effects
44
binding sites
32
histone modifications
28
differential activity
5
eQTL
2
caQTL
Date released
343
September, 2022
293
February, 2021
76
February, 2024
36
March, 2023
35
August, 2021
33
May, 2021
32
June, 2020
25
May, 2020
18
January, 2020
15
November, 2022
12
February, 2023
10
February, 2020
10
May, 2024
8
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
March, 2024
2
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
636
bed bed3+
197
tsv
114
bed bed9
98
bigWig
90
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
976
Homo sapiens
Biosample type
516
primary cell
355
tissue
78
cell line
27
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
976
AMP
160
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
753
hg19
197
GRCh38
organ_slims!
vein
BIOSAMPLE
TYPE
976 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
histone modifications
differential activity
eQTL
caQTL
primary cell
hepatocyte
2
13
7
2
1
2
1
4
endothelial cell
3
9
4
2
2
1
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 93 more…
tissue
kidney
29
7
10
14
16
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
1
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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