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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
63
accessible chromatin
50
target gene predictions
45
chromatin state
14
binding sites
11
histone modifications
3
eQTL
3
gene expression
2
variant allelic effects
Date released
125
September, 2022
67
February, 2021
24
February, 2023
22
November, 2022
14
June, 2020
5
May, 2021
4
February, 2024
3
August, 2017
3
October, 2022
2
February, 2020
2
January, 2020
2
January, 2022
2
March, 2024
2
May, 2020
1
March, 2020
Available data
230
bed bed3+
42
bed bed9
32
bigWig
4
tsv
Organism
278
Homo sapiens
Biosample type
204
tissue
44
cell line
24
primary cell
6
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
278
AMP
10
ENCODE
Genome assembly (visualization)
272
hg19
49
GRCh38
BIOSAMPLE
TYPE
278 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
1
14
13
1
retina
6
23
3
3
1
1
1
1
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
transverse colon
8
1
5
4
1
+ See 11 more…
cell line
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 6 more…
primary cell
retinal pigment epithelial cell
2
2
1
1
2
1
iris pigment epithelial cell
2
1
1
1
tracheal epithelial cell
1
2
2
fibroblast of the conjunctiva
2
1
1
retinal pigment epithelial cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
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