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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
40
candidate regulatory elements
28
target gene predictions
26
gene expression
23
chromatin state
22
accessible chromatin
14
binding sites
14
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
64
September, 2022
36
February, 2021
29
February, 2024
11
March, 2020
10
August, 2021
6
June, 2020
4
March, 2023
4
May, 2021
3
August, 2017
3
February, 2020
3
January, 2020
3
May, 2020
2
January, 2022
2
May, 2022
2
May, 2024
2
November, 2019
1
July, 2020
1
March, 2024
1
October, 2022
1
September, 2018
Available data
124
bed bed3+
29
tsv
20
bed bed9
20
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
188
Homo sapiens
Biosample type
92
tissue
61
primary cell
28
cell line
7
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
188
AMP
5
ENCODE
Genome assembly (visualization)
153
hg19
65
GRCh38
2
hg18
BIOSAMPLE
TYPE
188 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
10
1
9
4
1
2
7
1
1
spleen
15
8
1
6
2
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
2
13
1
7
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
2
1
1
1
2
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
+ See 1 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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