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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
77
target gene predictions
74
chromatin state
23
accessible chromatin
11
eQTL
11
gene expression
7
binding sites
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
6
caQTL
Date released
204
September, 2022
92
February, 2021
14
February, 2024
12
July, 2025
9
March, 2020
6
February, 2020
6
June, 2020
6
May, 2021
5
January, 2020
5
May, 2020
3
August, 2017
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
273
bed bed3+
71
bed bed9
21
tsv
8
bigWig
4
bed bed3
4
bed narrowPeak
3
bigBed bed9
Organism
375
Homo sapiens
Collection Tags
204
EpiMap
79
ENCODE
32
DGA
30
T2DKP
19
ChIP-Atlas
12
GTEx
7
T2DKP
4
T2D
2
AMP
1
T1D
1
eQTLCatalogue
Biosample type
305
tissue
51
primary cell
17
cell line
2
in vitro differentiated cells
Organ
2859
vasculature
2853
bodily fluid
2842
blood
2813
blood vessel
2658
vein
650
epithelium
509
kidney
467
brain
392
connective tissue
375
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
213
embryo
194
skin of body
168
large intestine
152
liver
143
extraembryonic component
110
stomach
105
eye
87
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
375
AMP
11
ENCODE
Genome assembly (visualization)
356
hg19
89
GRCh38
Encyclopedia version
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
375 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 18 more…
primary cell
skeletal muscle satellite cell
2
1
2
3
1
2
1
skeletal muscle cell
2
1
1
1
1
skeletal muscle fiber
2
2
2
type I muscle cell
2
1
1
1
type II muscle cell
2
1
1
1
+ See 7 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
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