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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
73
single cell RNA-seq
49
ATAC-seq
41
WGBS
21
snATAC-seq
3
Hi-C
Assay category
165
Transcription
70
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
February, 2021
7
August, 2020
3
October, 2022
Available data
153
zippedFastqFolder
124
fastq
10
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
279
Homo sapiens
Biosample type
279
primary cell
Organ
146
epithelium
146
pancreas
Project
556
AMP
279
HPAP
204
T1D
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
279
Klaus Kaestner, Upenn
Audit category:
3
audit script error
biosample_type!
cell line
month_released!
February, 2021
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
279 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
29
25
1
Langerhans cell
73
21
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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