Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
47
WGBS
37
snATAC-seq
22
ATAC-seq
3
Hi-C
Assay category
177
Transcription
59
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
107
May, 2022
76
February, 2023
59
September, 2020
34
February, 2021
7
August, 2020
3
October, 2022
Available data
158
fastq
126
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
286
Homo sapiens
Biosample type
286
primary cell
Organ
125
epithelium
125
pancreas
Project
4292
AMP
286
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
286
Klaus Kaestner, Upenn
Audit category:
19
audit script error
files.platform.term_name!
HiSeq HighOutput V4
BIOSAMPLE
ASSAY
286 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
snATAC-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
85
37
pancreatic alpha cell
42
31
13
1
exocrine cell
39
pancreatic beta cell
11
16
6
1
pancreatic acinar cell
3
1
Download