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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
single cell RNA-seq
37
ATAC-seq
16
total RNA-seq
11
snATAC-seq
3
Hi-C
Assay category
55
Transcription
48
DNA accessibility
3
3D chromatin structure
Date released
58
September, 2020
27
May, 2022
11
February, 2021
7
August, 2020
3
October, 2022
Available data
58
fastq
46
zippedFastqFolder
10
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
106
Homo sapiens
Biosample type
106
primary cell
Organ
56
epithelium
56
pancreas
Project
4292
AMP
244
T1D
106
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
106
Klaus Kaestner, Upenn
Audit category:
14
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files.platform.term_name!
Illumina NovaSeq 6000
BIOSAMPLE
ASSAY
106 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
39
11
pancreatic alpha cell
23
15
1
pancreatic beta cell
13
1
1
pancreatic acinar cell
1
1
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