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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 47WGBS
  • 39single cell RNA-seq
  • 37ATAC-seq
  • 16total RNA-seq
  • 11snATAC-seq
  • 3Hi-C
Assay category
  • 55Transcription
  • 48DNA accessibility
  • 47DNA methylation
  • 33D chromatin structure
Date released
  • 68May, 2022
  • 58September, 2020
  • 17February, 2021
  • 7August, 2020
  • 3October, 2022
Available data
  • 58fastq
  • 46zippedFastqFolder
  • 10bigWig
  • 6tsv
  • 3bedpe bed3+
  • 3cool
  • 3hic
Organism
  • 153Homo sapiens
Biosample type
  • 153primary cell
Organ
  • 103pancreas
  • 56epithelium
Project
  • 4293AMP
  • 244T1D
  • 153HPAP
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 10GRCh38
  • 3hg19
Lab
  • 153Klaus Kaestner, Upenn
Audit category:
  • 14audit script error
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  • Illumina NovaSeq 6000
BIOSAMPLE
ASSAY

153 results

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Clear Filters
WGBS
single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell3123151
Langerhans cell3911
pancreatic beta cell161311
pancreatic acinar cell11
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