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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 85single cell RNA-seq
  • 49ATAC-seq
  • 48snATAC-seq
  • 16total RNA-seq
  • 6WGBS
  • 3Hi-C
Assay category
  • 101Transcription
  • 97DNA accessibility
  • 6DNA methylation
  • 33D chromatin structure
Date released
  • 93May, 2022
  • 59September, 2020
  • 45February, 2021
  • 7August, 2020
  • 3October, 2022
Available data
  • 112zippedFastqFolder
  • 93fastq
  • 10bigWig
  • 6tsv
  • 3bedpe bed3+
  • 3cool
  • 3hic
Organism
  • 207Homo sapiens
Biosample type
  • 207primary cell
Organ
  • 74epithelium
  • 74pancreas
Project
  • 4157AMP
  • 244T1D
  • 207HPAP
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 10GRCh38
  • 3hg19
Lab
  • 207Klaus Kaestner, Upenn
Audit category:
  • 30audit script error
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  • 101
BIOSAMPLE
ASSAY

207 results

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Clear Filters
single cell RNA-seq
ATAC-seq
snATAC-seq
total RNA-seq
WGBS
Hi-C
primary cell
Langerhans cell8548
pancreatic alpha cell291561
pancreatic beta cell1611
pancreatic acinar cell41
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