Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 92total RNA-seq
  • 84single cell RNA-seq
  • 47WGBS
  • 32snATAC-seq
  • 10ATAC-seq
  • 3Hi-C
Assay category
  • 176Transcription
  • 47DNA methylation
  • 42DNA accessibility
  • 33D chromatin structure
Date released
  • 95May, 2022
  • 76February, 2023
  • 58September, 2020
  • 29February, 2021
  • 7August, 2020
  • 3October, 2022
Available data
  • 153fastq
  • 113zippedFastqFolder
  • 10bigWig
  • 6tsv
  • 3bedpe bed3+
  • 3cool
  • 3hic
Organism
  • 268Homo sapiens
Biosample type
  • 268primary cell
Organ
  • 113epithelium
  • 113pancreas
Project
  • 4142AMP
  • 268HPAP
  • 244T1D
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 10GRCh38
  • 3hg19
Lab
  • 268Klaus Kaestner, Upenn
Audit category:
  • 14audit script error
files.read_length!
  • 50
BIOSAMPLE
ASSAY

268 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
snATAC-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell8432
pancreatic alpha cell423171
exocrine cell39
pancreatic beta cell111631
pancreatic acinar cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego