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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 66single cell RNA-seq
  • 49ATAC-seq
  • 48snATAC-seq
  • 47WGBS
  • 3Hi-C
Assay category
  • 97DNA accessibility
  • 66Transcription
  • 47DNA methylation
  • 33D chromatin structure
Date released
  • 134May, 2022
  • 45February, 2021
  • 24September, 2020
  • 7August, 2020
  • 3October, 2022
Available data
  • 134zippedFastqFolder
  • 76fastq
  • 10bigWig
  • 6tsv
  • 3bedpe bed3+
  • 3cool
  • 3hic
Organism
  • 213Homo sapiens
Biosample type
  • 213primary cell
Organ
  • 99epithelium
  • 99pancreas
Project
  • 3477AMP
  • 244T1D
  • 213HPAP
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 10GRCh38
  • 3hg19
Lab
  • 213Klaus Kaestner, Upenn
Audit category:
  • 30audit script error
files.run_type!
  • single-ended
BIOSAMPLE
ASSAY

213 results

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single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell6648
pancreatic alpha cell29311
pancreatic beta cell16161
pancreatic acinar cell41
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