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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
48
snATAC-seq
47
WGBS
46
ATAC-seq
45
single cell RNA-seq
3
Hi-C
Assay category
121
Transcription
94
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
September, 2020
45
February, 2021
7
August, 2020
3
October, 2022
Available data
134
zippedFastqFolder
128
fastq
7
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
265
Homo sapiens
Biosample type
265
primary cell
Organ
133
epithelium
133
pancreas
Project
4178
AMP
265
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
7
GRCh38
3
hg19
Lab
265
Klaus Kaestner, Upenn
Audit category:
30
audit script error
lab.title!
Bing Ren, UCSD
month_released!
October, 2018
September, 2020
BIOSAMPLE
ASSAY
265 results
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total RNA-seq
snATAC-seq
WGBS
ATAC-seq
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
48
45
pancreatic alpha cell
27
31
27
1
pancreatic beta cell
10
16
15
1
exocrine cell
39
pancreatic acinar cell
4
1
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