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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
10
snATAC-seq
9
total RNA-seq
4
ChIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
pCHi-C
Assay category
21
DNA accessibility
9
Transcription
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
23
February, 2023
8
January, 2021
7
March, 2020
2
May, 2021
Available data
6
bam
6
bigWig
4
bed narrowPeak
2
tsv
Organism
40
Homo sapiens
Biosample type
primary cell
31
tissue
9
cell line
Organ
34
pancreas
4
epithelium
1
thymus
Project
3733
AMP
47
KPMP
40
T1D
19
LungMap
4
community
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
32
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
snATAC-seq
total RNA-seq
ChIP-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
pCHi-C
tissue
islet of Langerhans
11
6
7
2
pancreas
4
thymus
1
cell line
EndoC_BH1
2
2
3
2
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