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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
40
ChIP-seq
16
pCHi-C
8
snATAC-seq
Assay category
96
Transcription
40
DNA binding
8
DNA accessibility
Target of assay
84
histone
84
histone modification
broad histone mark
40
narrow histone mark
Date released
107
May, 2021
45
May, 2020
8
January, 2021
Available data
136
bam
136
bigWig
96
tsv
40
bed narrowPeak
40
tagAlign
Organism
160
Homo sapiens
Biosample type
160
primary cell
31
tissue
9
cell line
Organ
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
Project
481
AMP
324
HPAP
160
T1D
1
ITG
Genome assembly (visualization)
136
GRCh38
136
hg19
Lab
160
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
files.file_type!
bed bedgraph
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
160 results
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total RNA-seq
ChIP-seq
pCHi-C
snATAC-seq
primary cell
monocyte
53
40
1
peripheral blood mononuclear cell
8
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
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