Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 96total RNA-seq
  • 84ChIP-seq
  • 16pCHi-C
  • 8snATAC-seq
Assay category
  • 96Transcription
  • 84DNA binding
  • 8DNA accessibility
Target of assay
  • 84histone
  • 84histone modification
  • 44broad histone mark
  • 40narrow histone mark
Date released
  • 151May, 2021
  • 45May, 2020
  • 8January, 2021
Available data
  • 180bam
  • 180bigWig
  • 96tsv
  • 84bed narrowPeak
  • 84tagAlign
Organism
  • 204Homo sapiens
Biosample type
  • 204primary cell
  • 31tissue
  • 9cell line
Organ
  • 8blood
  • 8bodily fluid
  • 1bone element
  • 1bone marrow
  • 1connective tissue
Project
  • 559AMP
  • 324HPAP
  • 204T1D
  • 1ITG
Genome assembly (visualization)
  • 180GRCh38
  • 180hg19
Lab
  • 204Kyle Gaulton, UCSD
Audit category:
  • 5inconsistent ontology term
BIOSAMPLE
ASSAY

204 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
snATAC-seq
primary cell
monocyte53841
peripheral blood mononuclear cell8
B cell21
CD8-positive, alpha-beta T cell21
naive B cel21
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego