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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54total RNA-seq
  • 18snATAC-seq
  • 11ATAC-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 3ChIP-seq
  • 2HiChIP
Assay category
  • 54Transcription
  • 29DNA accessibility
  • 3DNA binding
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
Date released
  • May, 2021
  • 45May, 2020
  • 23February, 2023
  • 16January, 2021
  • 7March, 2020
Available data
  • 50bam
  • 50bigWig
  • 47tsv
  • 3bed narrowPeak
Organism
  • 91Homo sapiens
Biosample type
  • 53primary cell
  • 30tissue
  • 8cell line
Organ
  • 33pancreas
  • 8blood
  • 8bodily fluid
  • 3epithelium
Project
  • 4046AMP
  • 324HPAP
  • 91T1D
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 50GRCh38
  • 50hg19
Lab
  • 84Kyle Gaulton, UCSD
  • 7AMP-T2D consortium
Audit category:
  • 7inconsistent ontology term
month_released!
  • May, 2021
BIOSAMPLE
ASSAY

91 results

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Clear Filters
total RNA-seq
snATAC-seq
ATAC-seq
CRISPR genome editing followed by DNA sequencing
ChIP-seq
HiChIP
primary cell
peripheral blood mononuclear cell8
B cell2
CD8-positive, alpha-beta T cell2
T follicular helper cell2
T-helper 1 cell2
tissue
islet of Langerhans76112
pancreas4
cell line
EndoC_BH12312
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