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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 96total RNA-seq
  • 84ChIP-seq
  • 17pCHi-C
  • 8snATAC-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
Assay category
  • 96Transcription
  • 84DNA binding
  • 8DNA accessibility
Target of assay
  • 84histone
  • 84histone modification
  • 44broad histone mark
  • 40narrow histone mark
Date released
  • 152May, 2021
  • 45May, 2020
  • 8January, 2021
  • 5February, 2023
Available data
  • 180bam
  • 180bigWig
  • 96tsv
  • 84bed narrowPeak
  • 84tagAlign
Organism
  • 210Homo sapiens
Biosample type
  • 204primary cell
  • 5cell line
  • 1tissue
Organ
  • pancreas
  • 8blood
  • 8bodily fluid
  • 4epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 3532AMP
  • 210T1D
  • 172HPAP
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 180GRCh38
  • 180hg19
Lab
  • 210Kyle Gaulton, UCSD
Audit category:
  • 5inconsistent ontology term
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

210 results

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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
snATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
monocyte53841
peripheral blood mononuclear cell8
B cell21
CD8-positive, alpha-beta T cell21
naive B cel21
cell line
EndoC_BH132
tissue
thymus1
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