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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 40ChIP-seq
  • 34total RNA-seq
  • 14snATAC-seq
  • 13pCHi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
Assay category
  • 40DNA binding
  • 34Transcription
  • 14DNA accessibility
Target of assay
  • 40histone
  • 40histone modification
  • 25broad histone mark
  • 15narrow histone mark
Date released
  • 80May, 2021
  • 14January, 2021
  • 5February, 2023
  • 4May, 2020
  • 3March, 2020
Available data
  • 74bam
  • 74bigWig
  • 40bed narrowPeak
  • 38tagAlign
  • 34tsv
Organism
  • 106Homo sapiens
Biosample type
  • 88primary cell
  • 9cell line
  • 9tissue
Organ
  • 12pancreas
  • 6blood
  • 6bodily fluid
  • 4epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 3777AMP
  • 321HPAP
  • 106T1D
  • 47KPMP
  • 19LungMap
  • 4community
Genome assembly (visualization)
  • 74GRCh38
  • 74hg19
Lab
  • 102Kyle Gaulton, UCSD
  • 4AMP-T2D consortium
Audit category:
  • 5inconsistent ontology term
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

106 results

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Clear Filters
ChIP-seq
total RNA-seq
snATAC-seq
pCHi-C
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
monocyte38281
peripheral blood mononuclear cell6
CD4-positive, alpha-beta T cell2
B cell1
activated CD4-positive, alpha-beta T cell1
cell line
EndoC_BH12232
tissue
islet of Langerhans4
pancreas4
thymus1
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