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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
total RNA-seq
86
ChIP-seq
15
snATAC-seq
11
ATAC-seq
4
pCHi-C
2
HiChIP
Assay category
103
Transcription
86
DNA binding
26
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
139
May, 2021
45
May, 2020
20
February, 2023
13
January, 2021
4
March, 2020
Available data
182
bam
182
bigWig
96
tsv
86
bed narrowPeak
84
tagAlign
Organism
221
Homo sapiens
Biosample type
192
primary cell
27
tissue
2
cell line
Organ
27
pancreas
8
blood
8
bodily fluid
Project
3499
AMP
318
HPAP
221
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
182
GRCh38
182
hg19
Lab
217
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
replication_type!
isogenic
BIOSAMPLE
ASSAY
221 results
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total RNA-seq
ChIP-seq
snATAC-seq
ATAC-seq
pCHi-C
HiChIP
primary cell
monocyte
53
84
peripheral blood mononuclear cell
8
CD8-positive, alpha-beta T cell
2
1
B cell
2
T follicular helper cell
2
+ See 24 more…
tissue
islet of Langerhans
7
2
5
11
pancreas
2
cell line
EndoC_BH1
2
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