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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 103total RNA-seq
  • 86ChIP-seq
  • 15snATAC-seq
  • 11ATAC-seq
  • 4pCHi-C
  • 2HiChIP
Assay category
  • 103Transcription
  • 86DNA binding
  • 26DNA accessibility
Target of assay
  • 86histone
  • 86histone modification
  • 44broad histone mark
  • 42narrow histone mark
Date released
  • 139May, 2021
  • 45May, 2020
  • 20February, 2023
  • 13January, 2021
  • 4March, 2020
Available data
  • 182bam
  • 182bigWig
  • 96tsv
  • 86bed narrowPeak
  • 84tagAlign
Organism
  • 221Homo sapiens
Biosample type
  • 192primary cell
  • 27tissue
  • 2cell line
Organ
  • 27pancreas
  • 8blood
  • 8bodily fluid
Project
  • 3499AMP
  • 318HPAP
  • 221T1D
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 182GRCh38
  • 182hg19
Lab
  • 217Kyle Gaulton, UCSD
  • 4AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

221 results

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Clear Filters
total RNA-seq
ChIP-seq
snATAC-seq
ATAC-seq
pCHi-C
HiChIP
primary cell
monocyte5384
peripheral blood mononuclear cell8
CD8-positive, alpha-beta T cell21
B cell2
T follicular helper cell2
tissue
islet of Langerhans72511
pancreas2
cell line
EndoC_BH12
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