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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
329
accessible chromatin
224
gene expression
140
target gene predictions
119
differential activity
38
candidate regulatory elements
20
eQTL
19
caQTL
6
binding sites
2
pQTL
2
sQTL
1
variant allelic effects
Date released
333
November, 2021
282
September, 2023
56
January, 2021
54
February, 2024
51
August, 2021
40
May, 2024
33
July, 2025
19
April, 2020
9
March, 2023
7
February, 2021
7
October, 2022
6
May, 2022
2
January, 2025
1
February, 2023
Available data
516
bed bed3+
345
tsv
303
bigWig
25
txt
12
bed bed3
12
bed narrowPeak
2
csv
Organism
899
Homo sapiens
Collection Tags
356
AMP
338
T2DKP
281
KPMP
118
DGA
61
T2DKP
59
T1D
26
FNIH_projects-heart
12
FNIH_projects-liver
9
CMDGA
6
ENCODE
Biosample type
869
primary cell
20
tissue
9
cell line
in vitro differentiated cells
1
stem cell
Organ
372
epithelium
178
kidney
97
connective tissue
61
vasculature
40
pancreas
39
blood vessel
37
musculature of body
31
liver
19
intestine
12
heart
12
lung
12
lymphatic vessel
10
adrenal gland
10
skin of body
9
stomach
6
large intestine
6
mammary gland
5
artery
4
esophagus
4
eye
4
small intestine
3
bone element
3
bone marrow
3
bronchus
3
extraembryonic component
2
embryo
2
gonad
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
brain
1
thymus
Project
333
ENCODE
281
KPMP
189
AMP
60
T1D
19
LungMap
13
community
5
ITG
Genome assembly (visualization)
530
hg19
423
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
award.rfa!
AMP
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
900 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
caQTL
binding sites
pQTL
sQTL
variant allelic effects
primary cell
endothelial cell
15
4
7
3
2
2
fibroblast
16
4
3
smooth muscle cell
9
1
6
2
2
2
macrophage
13
1
2
3
1
1
pericyte cell
10
9
2
+ See 230 more…
tissue
kidney
7
7
1
cartilage tissue
2
2
synovial joint
1
cell line
induced pluripotent stem cell
7
EndoC_BH1
2
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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