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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 92total RNA-seq
  • 34single cell RNA-seq
  • 27snATAC-seq
  • 11ATAC-seq
Assay category
  • 126Transcription
  • 38DNA accessibility
Date released
  • 76February, 2023
  • 41September, 2020
  • 39February, 2021
  • 7August, 2020
  • 1October, 2017
Available data
  • 216bigWig
  • 186bam
  • 170bed narrowPeak
  • 164fastq
  • 115tsv
  • 112zippedFastqFolder
  • 84tagAlign
  • 64xls
  • 60txt
  • 7hic
  • 5bedpe bed3+
  • 3bed bed3+
  • 3bed bedgraph
  • 3cool
  • 1bed broadPeak
  • 1bedpe
  • 1tbi
  • 1vcf
Organism
  • 164Homo sapiens
Biosample type
  • 163primary cell
  • 1tissue
Organ
  • 64pancreas
  • 63epithelium
Project
  • 163HPAP
  • 1AMP
Genome assembly (visualization)
  • 11GRCh38
  • 1hg19
Lab
  • 163Klaus Kaestner, Upenn
  • 1Stephen Parker, UMich
Audit category:
  • 27audit script error
award.rfa!
  • AMP
BIOSAMPLE
ASSAY

164 results

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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
primary cell
Langerhans cell3427
pancreatic alpha cell427
exocrine cell39
pancreatic beta cell113
tissue
islet of Langerhans1
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