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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 108total RNA-seq
  • 6WGBS
  • 1snATAC-seq
Assay category
  • 108Transcription
  • 6DNA methylation
  • 1DNA accessibility
Date released
  • 51May, 2021
  • 45May, 2020
  • 10August, 2021
  • 6February, 2021
  • 2March, 2020
  • 1July, 2025
Available data
  • 216bigWig
  • 186bam
  • 170bed narrowPeak
  • 170fastq
  • 153zippedFastqFolder
  • 115tsv
  • 84tagAlign
  • 64xls
  • 60txt
  • 7hic
  • 5bedpe bed3+
  • 3bed bed3+
  • 3bed bedgraph
  • 3cool
  • 1bed broadPeak
  • 1bedpe
  • 1tbi
  • 1vcf
Organism
  • 114Homo sapiens
Biosample type
  • 102primary cell
  • 11cell line
  • 2tissue
Organ
  • 9liver
  • 9pancreas
  • 8epithelium
  • 1musculature of body
Project
  • 98T1D
  • 11AMP
  • 6HPAP
Genome assembly (visualization)
  • 99GRCh38
  • 98hg19
Lab
  • 96Kyle Gaulton, UCSD
  • 10Bing Ren, UCSD
  • 6Klaus Kaestner, Upenn
  • 2AMP-T2D consortium
  • 1Stephen Parker, UMich
Audit category:
  • 6inconsistent ontology term
award.rfa!
  • AMP
BIOSAMPLE
ASSAY

115 results

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Clear Filters
total RNA-seq
WGBS
snATAC-seq
primary cell
monocyte53
pancreatic alpha cell6
B cell2
CD8-positive, alpha-beta T cell2
T follicular helper cell2
cell line
HepG29
EndoC_BH12
tissue
islet of Langerhans1
skeletal muscle tissue1
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